BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028E06SP1|AL428918
(860 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1782 1523 0.0
>3x_Contig1782
Length = 24703
Score = 1523 bits (748), Expect = 0.0
Identities = 815/860 (94%)
Strand = Plus / Plus
Query: 1 atcaaagtcttcaaatcttcaaatttacggcacctaagccggccgttactatgtaacgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22184 atcaaagtcttcaaatcttcaaatttacggcacctaagccggccgttactatgtaacgca 22243
Query: 61 caagatctgataggaaaaawaaaaactaawawtcccttatgcggcaagcggaccgaatac 120
||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||
Sbjct: 22244 caagatctgataggaaaaaaaaaaactaaaaatcccttatgcggcaagcggaccgaatac 22303
Query: 121 agcaagcaacctttcaacggacctctcttcgtaatttcacagacaacaatggtggatcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22304 agcaagcaacctttcaacggacctctcttcgtaatttcacagacaacaatggtggatcaa 22363
Query: 181 acgcctaaccagagagaaggattccaaaataaaawawaaaaaaaawtttaacaatcgaac 240
|||||||||||||||||||||||||||||||||| | |||||||| || |||||||||||
Sbjct: 22364 acgcctaaccagagagaaggattccaaaataaaaaaaaaaaaaaaattaaacaatcgaac 22423
Query: 241 ccaaaatcaatcaatccctttttggtgrgaagaagrgcgawttttwggttwgtttcwttc 300
|||||||||||||||||||| |||||| ||||||| |||| |||| |||| || || |||
Sbjct: 22424 ccaaaatcaatcaatcccttattggtgagaagaagagcgaattttaggttagtatcattc 22483
Query: 301 gawttaaacaacggactwtttctggggggggaaagacattgagctggggatwtcwtgtct 360
|| |||||||||||||| ||||||||||| ||||||||||||||||| ||| || |||||
Sbjct: 22484 gaattaaacaacggactatttctggggggagaaagacattgagctggagatatcatgtct 22543
Query: 361 agactcagaaggttggttaatgaagttcttwwtcacatgttaawtgwtagtgatgrggaa 420
|||||||||||||||| ||||||||||||| ||||||||||| || |||||||| ||||
Sbjct: 22544 agactcagaaggttggataatgaagttcttaatcacatgttaaatgatagtgatgaggaa 22603
Query: 421 tcaaactcagacgtgccggatggcatgtctttcttcccgatggwtacagcagaacaacaa 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 22604 tcaaactcagacgtgccggatggcatgtctttcttcccgatggatacagcagaacaacaa 22663
Query: 481 gatttgwttwggaawttggaattwaggracaatttgawaaacgacaaatacttgatawtt 540
|||||| || |||| |||||||| ||| ||||||||| ||||||||||||||||| | |
Sbjct: 22664 gatttgattaggaaattggaattaaggaacaatttgaaaaacgacaaatacttgaaaata 22723
Query: 541 ttgacgttcctwtacttagtcgtttgcgggatgttttttcttctggcaacaagaattaag 600
||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 22724 ttgacgttcctatacttagtcgtttgcgggatgtttatacttctggcaacaagaattaag 22783
Query: 601 agaaaawacgaaacattgggaccttacagaaaawtwtttttgttttccgcacaatcaata 660
|||||| |||||||||||||||||||||||||| | || |||||||||||||||||||||
Sbjct: 22784 agaaaaaacgaaacattgggaccttacagaaaaatattattgttttccgcacaatcaata 22843
Query: 661 agctgctccgtgattactcttcgatatgaattcattcacaactatttcaaagttagaagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22844 agctgctccgtgattactcttcgatatgaattcattcacaactatttcaaagttagaagg 22903
Query: 721 atgaatttttatttaagcagccaaagattaaacattttgaactttgtcatgttaatattc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22904 atgaatttttatttaagcagccaaagattaaacattttgaactttgtcatgttaatattc 22963
Query: 781 ctttcatggatcatccttaatcaaggkggttccactgccttgttattattatgtcatatt 840
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 22964 ctttcatggatcatccttaatcaaggtggttccactgccttgttattattatgtcatatt 23023
Query: 841 ccacatttgttattcatagt 860
||||||||||||||||||||
Sbjct: 23024 ccacatttgttattcatagt 23043
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5101
Number of Sequences: 1807
Number of extensions: 5101
Number of successful extensions: 123
Number of sequences better than 1.0e-20: 1
length of query: 860
length of database: 10,358,551
effective HSP length: 16
effective length of query: 844
effective length of database: 10,329,639
effective search space: 8718215316
effective search space used: 8718215316
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.2 bits)